HL_4WSM_165
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAGUGCGUAAUAGCUC
- Length
- 16 nucleotides
- Bulged bases
- 4WSM|1|1H|A|1088, 4WSM|1|1H|A|1095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WSM_165 not in the Motif Atlas
- Homologous match to HL_5J7L_162
- Geometric discrepancy: 0.4381
- The information below is about HL_5J7L_162
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04775.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4WSM|1|1H|G|1087
4WSM|1|1H|A|1088
4WSM|1|1H|G|1089
4WSM|1|1H|U|1090
4WSM|1|1H|G|1091
4WSM|1|1H|C|1092
4WSM|1|1H|G|1093
4WSM|1|1H|U|1094
4WSM|1|1H|A|1095
4WSM|1|1H|A|1096
4WSM|1|1H|U|1097
4WSM|1|1H|A|1098
4WSM|1|1H|G|1099
4WSM|1|1H|C|1100
4WSM|1|1H|U|1101
4WSM|1|1H|C|1102
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 51
- 50S ribosomal protein L6
Coloring options: