HL_4WT1_242
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GG(5MU)(PSU)CAAAUCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT1_242 not in the Motif Atlas
- Homologous match to HL_5E81_236
- Geometric discrepancy: 0.0679
- The information below is about HL_5E81_236
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.2
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4WT1|1|2K|G|53
4WT1|1|2K|G|54
4WT1|1|2K|5MU|55
4WT1|1|2K|PSU|56
4WT1|1|2K|C|57
4WT1|1|2K|A|58
4WT1|1|2K|A|59
4WT1|1|2K|A|60
4WT1|1|2K|U|61
4WT1|1|2K|C|62
4WT1|1|2K|C|63
Current chains
- Chain 2K
- tRNA-fMet
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 41
- 50S ribosomal protein L5
- Chain 88
- 50S ribosomal protein L16
- Chain I8
- 50S ribosomal protein L27
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