HL_4WT8_014

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_014 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.1087

The information below is about HL_4LFB_014

Detailed Annotation

GNRA-like with tWH

Broad Annotation

GNRA

Motif group

HL_92337.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

3

Unit IDs

4WT8|1|Ab|G|601
4WT8|1|Ab|C|602
4WT8|1|Ab|U|603
4WT8|1|Ab|C|604
4WT8|1|Ab|A|605
4WT8|1|Ab|A|606
4WT8|1|Ab|C|607

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AP

30S ribosomal protein S16