HL_4WT8_055

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

4WT8|1|Bb|G|1077

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_055 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1078

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

4WT8|1|Bb|G|1072
4WT8|1|Bb|U|1073
4WT8|1|Bb|U|1074
4WT8|1|Bb|A|1075
4WT8|1|Bb|A|1076
4WT8|1|Bb|G|1077
4WT8|1|Bb|U|1078
4WT8|1|Bb|C|1079

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BA

30S ribosomal protein S2

Chain BG

30S ribosomal protein S7