HL_4WT8_065

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

4WT8|1|C1|G|122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_065 not in the Motif Atlas

Homologous match to HL_7A0S_003

Geometric discrepancy: 0.122

The information below is about HL_7A0S_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4WT8|1|C1|G|120
4WT8|1|C1|G|121
4WT8|1|C1|G|122
4WT8|1|C1|A|123
4WT8|1|C1|A|124
4WT8|1|C1|C|125

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain C8

50S ribosomal protein L34

Chain CX

50S ribosomal protein L23