HL_4WT8_086

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

4WT8|1|C1|A|827, 4WT8|1|C1|A|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_086 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1198

The information below is about HL_7A0S_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

4WT8|1|C1|U|825
4WT8|1|C1|G|826
4WT8|1|C1|A|827
4WT8|1|C1|A|828
4WT8|1|C1|A|829
4WT8|1|C1|A|830
4WT8|1|C1|G|831

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CB

50S ribosomal protein L2