HL_4WT8_123

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

4WT8|1|C1|G|2540

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_123 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.0977

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

4WT8|1|C1|U|2539
4WT8|1|C1|G|2540
4WT8|1|C1|A|2541
4WT8|1|C1|A|2542
4WT8|1|C1|G|2543
4WT8|1|C1|A|2544
4WT8|1|C1|A|2545
4WT8|1|C1|G|2546

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain C0

50S ribosomal protein L36

Chain CF

50S ribosomal protein L6