HL_4WT8_126

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_126 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3105

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4WT8|1|C1|C|2669
4WT8|1|C1|G|2670
4WT8|1|C1|A|2671
4WT8|1|C1|G|2672
4WT8|1|C1|A|2673
4WT8|1|C1|G|2674

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CF

50S ribosomal protein L6