HL_4WT8_140
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT8_140 not in the Motif Atlas
- Homologous match to HL_5HR7_006
- Geometric discrepancy: 0.0974
- The information below is about HL_5HR7_006
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
4WT8|1|C4|G|54
4WT8|1|C4|U|55
4WT8|1|C4|U|56
4WT8|1|C4|C|57
4WT8|1|C4|A|58
4WT8|1|C4|A|59
4WT8|1|C4|A|60
4WT8|1|C4|U|61
4WT8|1|C4|C|62
Current chains
- Chain C4
- P site trNA
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain CE
- 50S ribosomal protein L5
- Chain CP
- 50S ribosomal protein L16
Coloring options: