HL_4WT8_184

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4WT8|1|D1|U|1739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_184 not in the Motif Atlas

Geometric match to HL_7RQB_042

Geometric discrepancy: 0.1158

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

4WT8|1|D1|C|1737
4WT8|1|D1|U|1738
4WT8|1|D1|U|1739
4WT8|1|D1|C|1740
4WT8|1|D1|G|1741
4WT8|1|D1|G|1742

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain Bb

Small subunit ribosomal RNA; SSU rRNA

Chain DB

50S ribosomal protein L2