HL_4WT8_193

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4WT8|1|D1|C|2166

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_193 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.4976

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

4WT8|1|D1|C|2164
4WT8|1|D1|U|2165
4WT8|1|D1|C|2166
4WT8|1|D1|C|2167
4WT8|1|D1|G|2168
4WT8|1|D1|G|2169

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain Ab

Small subunit ribosomal RNA; SSU rRNA

Chain BK

30S ribosomal protein S11