HL_4WT8_194
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CGGAUG
- Length
- 6 nucleotides
- Bulged bases
- 4WT8|1|D1|G|2226, 4WT8|1|D1|G|2227, 4WT8|1|D1|U|2229
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT8_194 not in the Motif Atlas
- Geometric match to HL_6U8D_003
- Geometric discrepancy: 0.1892
- The information below is about HL_6U8D_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32346.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 10
Unit IDs
4WT8|1|D1|C|2225
4WT8|1|D1|G|2226
4WT8|1|D1|G|2227
4WT8|1|D1|A|2228
4WT8|1|D1|U|2229
4WT8|1|D1|G|2230
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain DB
- 50S ribosomal protein L2
- Chain DH
- 50S ribosomal protein L28
- Chain DI
- 50S ribosomal protein L9
Coloring options: