HL_4WT8_199

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCUGCAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_199 not in the Motif Atlas

Homologous match to HL_7RQB_057

Geometric discrepancy: 0.0879

The information below is about HL_7RQB_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53619.1

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

4WT8|1|D1|C|2366
4WT8|1|D1|C|2367
4WT8|1|D1|U|2368
4WT8|1|D1|G|2369
4WT8|1|D1|C|2370
4WT8|1|D1|A|2371
4WT8|1|D1|A|2372
4WT8|1|D1|G|2373

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain D9

50S ribosomal protein L35

Chain DO

50S ribosomal protein L15

Chain Da

50S ribosomal protein L27