HL_4WT8_235
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UUCCCAUUCCGAACA
- Length
- 15 nucleotides
- Bulged bases
- 4WT8|1|Cs|U|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT8_235 not in the Motif Atlas
- Homologous match to HL_9DFE_067
- Geometric discrepancy: 0.1225
- The information below is about HL_9DFE_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4WT8|1|Cs|U|34
4WT8|1|Cs|U|35
4WT8|1|Cs|C|36
4WT8|1|Cs|C|37
4WT8|1|Cs|C|38
4WT8|1|Cs|A|39
4WT8|1|Cs|U|40
4WT8|1|Cs|U|41
4WT8|1|Cs|C|42
4WT8|1|Cs|C|43
4WT8|1|Cs|G|44
4WT8|1|Cs|A|45
4WT8|1|Cs|A|46
4WT8|1|Cs|C|47
4WT8|1|Cs|A|48
Current chains
- Chain Cs
- 5S rRNA (119-MER)
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain CE
- 50S ribosomal protein L5
- Chain CR
- 50S ribosomal protein L18
Coloring options: