HL_4WU1_166
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GAGUGCGUAAUAGCUC
- Length
- 16 nucleotides
- Bulged bases
- 4WU1|1|1H|A|1088, 4WU1|1|1H|A|1096
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WU1_166 not in the Motif Atlas
- Homologous match to HL_5J7L_162
- Geometric discrepancy: 0.5129
- The information below is about HL_5J7L_162
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04775.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4WU1|1|1H|G|1087
4WU1|1|1H|A|1088
4WU1|1|1H|G|1089
4WU1|1|1H|U|1090
4WU1|1|1H|G|1091
4WU1|1|1H|C|1092
4WU1|1|1H|G|1093
4WU1|1|1H|U|1094
4WU1|1|1H|A|1095
4WU1|1|1H|A|1096
4WU1|1|1H|U|1097
4WU1|1|1H|A|1098
4WU1|1|1H|G|1099
4WU1|1|1H|C|1100
4WU1|1|1H|U|1101
4WU1|1|1H|C|1102
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 51
- 50S ribosomal protein L6
Coloring options: