HL_4WWW_058

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

4WWW|1|RA|U|958, 4WWW|1|RA|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_058 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1547

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4WWW|1|RA|U|955
4WWW|1|RA|G|956
4WWW|1|RA|C|957
4WWW|1|RA|U|958
4WWW|1|RA|A|959
4WWW|1|RA|A|960
4WWW|1|RA|C|961
4WWW|1|RA|G|962

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RB

5S ribosomal RNA; 5S rRNA

Chain RM

50S ribosomal protein L16