HL_4WWW_059

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_059 not in the Motif Atlas

Homologous match to HL_4WF9_028

Geometric discrepancy: 0.1581

The information below is about HL_4WF9_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4WWW|1|RA|G|978
4WWW|1|RA|A|979
4WWW|1|RA|A|980
4WWW|1|RA|A|981
4WWW|1|RA|C|982
4WWW|1|RA|A|983
4WWW|1|RA|A|984
4WWW|1|RA|C|985

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RQ

50S ribosomal protein L20

Chain RR

50S ribosomal protein L21

Chain RZ

50S ribosomal protein L30