HL_4WWW_063

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_063 not in the Motif Atlas

Homologous match to HL_5J7L_164

Geometric discrepancy: 0.1079

The information below is about HL_5J7L_164

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4WWW|1|RA|U|1222
4WWW|1|RA|G|1223
4WWW|1|RA|U|1224
4WWW|1|RA|G|1225
4WWW|1|RA|A|1226
4WWW|1|RA|G|1227

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RL

50S ribosomal protein L15

Chain RQ

50S ribosomal protein L20

Chain RR

50S ribosomal protein L21