HL_4WWW_083

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

ACGCCAGU

Length

8 nucleotides

Bulged bases

4WWW|1|RA|C|2143, 4WWW|1|RA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_083 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.3526

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4WWW|1|RA|A|2142
4WWW|1|RA|C|2143
4WWW|1|RA|G|2144
4WWW|1|RA|C|2145
4WWW|1|RA|C|2146
4WWW|1|RA|A|2147
4WWW|1|RA|G|2148
4WWW|1|RA|U|2149

Current chains

Chain RA

23S rRNA

Nearby chains