HL_4WWW_184
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUGAAGAUGCA
- Length
- 12 nucleotides
- Bulged bases
- 4WWW|1|YA|A|2030, 4WWW|1|YA|A|2031, 4WWW|1|YA|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WWW_184 not in the Motif Atlas
- Geometric match to HL_4V7M_040
- Geometric discrepancy: 0.3907
- The information below is about HL_4V7M_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4WWW|1|YA|U|2026
4WWW|1|YA|G|2027
4WWW|1|YA|U|2028
4WWW|1|YA|G|2029
4WWW|1|YA|A|2030
4WWW|1|YA|A|2031
4WWW|1|YA|G|2032
4WWW|1|YA|A|2033
4WWW|1|YA|U|2034
4WWW|1|YA|G|2035
4WWW|1|YA|C|2036
4WWW|1|YA|A|2037
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y0
- 50S ribosomal protein L32
- Chain YD
- 50S ribosomal protein L3
- Chain YJ
- 50S ribosomal protein L13
Coloring options: