HL_4WWW_188
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 4WWW|1|YA|A|2268, 4WWW|1|YA|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WWW_188 not in the Motif Atlas
- Homologous match to HL_5J7L_187
- Geometric discrepancy: 0.1917
- The information below is about HL_5J7L_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4WWW|1|YA|C|2264
4WWW|1|YA|U|2265
4WWW|1|YA|A|2266
4WWW|1|YA|A|2267
4WWW|1|YA|A|2268
4WWW|1|YA|G|2269
4WWW|1|YA|A|2270
4WWW|1|YA|G|2271
4WWW|1|YA|U|2272
4WWW|1|YA|A|2273
4WWW|1|YA|A|2274
4WWW|1|YA|C|2275
4WWW|1|YA|G|2276
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YM
- 50S ribosomal protein L16
- Chain YW
- 50S ribosomal protein L27
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