3D structure

PDB id
4WZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-fMet and mRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
UAUUGAAGCA
Length
10 nucleotides
Bulged bases
4WZO|1|14|C|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4WZO_049 not in the Motif Atlas
Homologous match to HL_7RQB_018
Geometric discrepancy: 0.0908
The information below is about HL_7RQB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

4WZO|1|14|U|566
4WZO|1|14|A|567
4WZO|1|14|U|568
4WZO|1|14|U|569
4WZO|1|14|G|570
4WZO|1|14|A|571
4WZO|1|14|A|572
4WZO|1|14|G|573
4WZO|1|14|C|574
4WZO|1|14|A|575

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 29
50S ribosomal protein L3
Chain 35
50S ribosomal protein L15
Chain 95
50S ribosomal protein L21
Chain J5
50S ribosomal protein L32

Coloring options:


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