3D structure

PDB id
4WZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-fMet and mRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GGAUGCAAAC
Length
10 nucleotides
Bulged bases
4WZO|1|1H|U|747, 4WZO|1|1H|A|751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4WZO_157 not in the Motif Atlas
Homologous match to HL_7RQB_023
Geometric discrepancy: 0.0698
The information below is about HL_7RQB_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.6
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
6

Unit IDs

4WZO|1|1H|G|744
4WZO|1|1H|G|745
4WZO|1|1H|A|746
4WZO|1|1H|U|747
4WZO|1|1H|G|748
4WZO|1|1H|C|749
4WZO|1|1H|A|750
4WZO|1|1H|A|751
4WZO|1|1H|A|752
4WZO|1|1H|C|753

Current chains

Chain 1H
23S ribosomal RNA

Nearby chains

Chain 21
50S ribosomal protein L3
Chain E8
50S ribosomal protein L22
Chain N8
50S ribosomal protein L32
Chain P8
50S ribosomal protein L34

Coloring options:


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