HL_4YY3_017

3D structure

PDB id

4YY3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit- HigB complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

4YY3|1|A|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4YY3_017 not in the Motif Atlas

Homologous match to HL_4LFB_017

Geometric discrepancy: 0.0601

The information below is about HL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4YY3|1|A|G|786
4YY3|1|A|A|787
4YY3|1|A|U|788
4YY3|1|A|U|789
4YY3|1|A|A|790
4YY3|1|A|G|791
4YY3|1|A|A|792
4YY3|1|A|U|793
4YY3|1|A|A|794
4YY3|1|A|C|795
4YY3|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11