3D structure

PDB id
4YY3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S ribosomal subunit- HigB complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
4YY3|1|A|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4YY3_017 not in the Motif Atlas
Homologous match to HL_4LFB_017
Geometric discrepancy: 0.0601
The information below is about HL_4LFB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

4YY3|1|A|G|786
4YY3|1|A|A|787
4YY3|1|A|U|788
4YY3|1|A|U|789
4YY3|1|A|A|790
4YY3|1|A|G|791
4YY3|1|A|A|792
4YY3|1|A|U|793
4YY3|1|A|A|794
4YY3|1|A|C|795
4YY3|1|A|C|796

Current chains

Chain A
16S rRNA

Nearby chains

Chain K
30S ribosomal protein S11

Coloring options:


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