HL_4Z8C_089
3D structure
- PDB id
- 4Z8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 4Z8C|1|1a|G|949
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4Z8C_089 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.0828
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4Z8C|1|1a|G|941
4Z8C|1|1a|A|942
4Z8C|1|1a|A|943
4Z8C|1|1a|G|944
4Z8C|1|1a|C|945
4Z8C|1|1a|A|946
4Z8C|1|1a|A|947
4Z8C|1|1a|C|948
4Z8C|1|1a|G|949
4Z8C|1|1a|C|950
Current chains
- Chain 1a
- 16S ribosomal RNA
Nearby chains
- Chain 1i
- 30S ribosomal protein S9
- Chain 1j
- 30S ribosomal protein S10
- Chain 1n
- 30S ribosomal protein S14 type Z
- Chain 1x
- Transfer RNA; tRNA
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