HL_4ZSN_220
3D structure
- PDB id
- 4ZSN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S-wild-type HigB toxin complex bound to a AAA lysine codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGUGCGUAAUAGCUC
- Length
- 16 nucleotides
- Bulged bases
- 4ZSN|1|YA|A|1088, 4ZSN|1|YA|G|1089, 4ZSN|1|YA|A|1095
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4ZSN_220 not in the Motif Atlas
- Homologous match to HL_5J7L_162
- Geometric discrepancy: 0.3876
- The information below is about HL_5J7L_162
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04775.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4ZSN|1|YA|G|1087
4ZSN|1|YA|A|1088
4ZSN|1|YA|G|1089
4ZSN|1|YA|U|1090
4ZSN|1|YA|G|1091
4ZSN|1|YA|C|1092
4ZSN|1|YA|G|1093
4ZSN|1|YA|U|1094
4ZSN|1|YA|A|1095
4ZSN|1|YA|A|1096
4ZSN|1|YA|U|1097
4ZSN|1|YA|A|1098
4ZSN|1|YA|G|1099
4ZSN|1|YA|C|1100
4ZSN|1|YA|U|1101
4ZSN|1|YA|C|1102
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y9
- 50S ribosomal protein L36
- Chain YH
- 50S ribosomal protein L6
Coloring options: