HL_5A8L_010

3D structure

PDB id

5A8L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human eRF1 and the hCMV nascent peptide in the translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUAGGAA

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56406.1

Basepair signature

cWW-R-R-R-R

Number of instances in this motif group

28

Unit IDs

5A8L|1|P|U|32
5A8L|1|P|U|33
5A8L|1|P|A|34
5A8L|1|P|G|35
5A8L|1|P|G|36
5A8L|1|P|A|37
5A8L|1|P|A|38

Current chains

Chain P

P-SITE TRNA

Nearby chains

Chain B

Small subunit ribosomal RNA; SSU rRNA

Chain Q

EUKARYOTIC RELEASE FACTOR ERF1

Chain R

MRNA