HL_5AA0_090
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 5AA0|1|BA|G|971||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AA0_090 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.3452
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5AA0|1|BA|G|963||||P_1
5AA0|1|BA|A|964||||P_1
5AA0|1|BA|A|965||||P_1
5AA0|1|BA|G|966||||P_1
5AA0|1|BA|C|967||||P_1
5AA0|1|BA|A|968||||P_1
5AA0|1|BA|A|969||||P_1
5AA0|1|BA|C|970||||P_1
5AA0|1|BA|G|971||||P_1
5AA0|1|BA|C|972||||P_1
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BD
- Transfer RNA; tRNA
- Chain BE
- Transfer RNA; tRNA
- Chain BM
- 30S ribosomal protein S9
- Chain BN
- 30S ribosomal protein S10
- Chain BQ
- 30S ribosomal protein S13
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