HL_5AJ0_024
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCGAAAGAC
- Length
- 9 nucleotides
- Bulged bases
- 5AJ0|1|A2|A|1612, 5AJ0|1|A2|G|1615
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87993.1
- Basepair signature
- cWW-cWW-tSW-R
- Number of instances in this motif group
- 7
Unit IDs
5AJ0|1|A2|G|1609
5AJ0|1|A2|C|1610
5AJ0|1|A2|G|1611
5AJ0|1|A2|A|1612
5AJ0|1|A2|A|1613
5AJ0|1|A2|A|1614
5AJ0|1|A2|G|1615
5AJ0|1|A2|A|1616
5AJ0|1|A2|C|1617
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L8
- Chain AN
- 60S ribosomal protein L15
- Chain Aj
- 60S ribosomal protein L37
Coloring options: