HL_5AJ0_059

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

5AJ0|1|A2|A|4176, 5AJ0|1|A2|C|4183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38117.1

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

15

Unit IDs

5AJ0|1|A2|U|4172
5AJ0|1|A2|C|4173
5AJ0|1|A2|A|4174
5AJ0|1|A2|A|4175
5AJ0|1|A2|A|4176
5AJ0|1|A2|C|4177
5AJ0|1|A2|G|4178
5AJ0|1|A2|G|4179
5AJ0|1|A2|U|4180
5AJ0|1|A2|A|4181
5AJ0|1|A2|A|4182
5AJ0|1|A2|C|4183
5AJ0|1|A2|G|4184

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AI

60S ribosomal protein L10

Chain AT

60S ribosomal protein L21

Chain Ab

60S ribosomal protein L29