HL_5AJ0_126
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGGUUCCGG
- Length
- 9 nucleotides
- Bulged bases
- 5AJ0|1|A2|G|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AJ0_126 not in the Motif Atlas
- Homologous match to HL_8C3A_039
- Geometric discrepancy: 0.5222
- The information below is about HL_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
5AJ0|1|A2|C|2683
5AJ0|1|A2|G|2684
5AJ0|1|A2|G|2685
5AJ0|1|A2|U|2686
5AJ0|1|A2|U|2687
5AJ0|1|A2|C|2688
5AJ0|1|A2|C|2689
5AJ0|1|A2|G|2690
5AJ0|1|A2|G|2691
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AR
- 60S ribosomal protein L19
- Chain AU
- 60S ribosomal protein L22
- Chain AX
- 60S ribosomal protein L23a
- Chain Ak
- 60S ribosomal protein L38
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