HL_5AN9_007

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUUAAUUAAAA

Length

11 nucleotides

Bulged bases

5AN9|1|N|A|2405, 5AN9|1|N|A|2406, 5AN9|1|N|U|2407, 5AN9|1|N|A|2411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77780.1

Basepair signature

cWW-tWH-tWH-R

Number of instances in this motif group

13

Unit IDs

5AN9|1|N|U|2402
5AN9|1|N|U|2403
5AN9|1|N|U|2404
5AN9|1|N|A|2405
5AN9|1|N|A|2406
5AN9|1|N|U|2407
5AN9|1|N|U|2408
5AN9|1|N|A|2409
5AN9|1|N|A|2410
5AN9|1|N|A|2411
5AN9|1|N|A|2412

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain J

RIBOSOME MATURATION PROTEIN SBDS