3D structure

PDB id
5AN9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mechanism of eIF6 release from the nascent 60S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
UCUAAUUAG
Length
9 nucleotides
Bulged bases
5AN9|1|N|U|2564
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_79306.1
Basepair signature
cWW-bif-R-tSH-R
Number of instances in this motif group
20

Unit IDs

5AN9|1|N|U|2558
5AN9|1|N|C|2559
5AN9|1|N|U|2560
5AN9|1|N|A|2561
5AN9|1|N|A|2562
5AN9|1|N|U|2563
5AN9|1|N|U|2564
5AN9|1|N|A|2565
5AN9|1|N|G|2566

Current chains

Chain N
26S RIBOSOMAL RNA

Nearby chains

Chain E
60S RIBOSOMAL PROTEIN L23
Chain J
RIBOSOME MATURATION PROTEIN SBDS

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1588 s