HL_5AN9_014

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

5AN9|1|N|G|2951

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_60919.1

Basepair signature

cWW-R-R-R-R-R

Number of instances in this motif group

17

Unit IDs

5AN9|1|N|C|2949
5AN9|1|N|U|2950
5AN9|1|N|G|2951
5AN9|1|N|G|2952
5AN9|1|N|G|2953
5AN9|1|N|G|2954
5AN9|1|N|C|2955
5AN9|1|N|G|2956
5AN9|1|N|G|2957

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain F

60S RIBOSOMAL PROTEIN L10

Chain J

RIBOSOME MATURATION PROTEIN SBDS