HL_5AN9_015

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAAAAGAUAACG

Length

13 nucleotides

Bulged bases

5AN9|1|N|A|2970, 5AN9|1|N|C|2977

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38117.1

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

15

Unit IDs

5AN9|1|N|U|2966
5AN9|1|N|U|2967
5AN9|1|N|A|2968
5AN9|1|N|A|2969
5AN9|1|N|A|2970
5AN9|1|N|A|2971
5AN9|1|N|G|2972
5AN9|1|N|A|2973
5AN9|1|N|U|2974
5AN9|1|N|A|2975
5AN9|1|N|A|2976
5AN9|1|N|C|2977
5AN9|1|N|G|2978

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain F

60S RIBOSOMAL PROTEIN L10