HL_5AN9_027

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

5AN9|1|N|G|3452, 5AN9|1|N|C|3456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69076.1

Basepair signature

cWW-tSH-cWH-tSH-tWH-tHW-tHW-tSW

Number of instances in this motif group

12

Unit IDs

5AN9|1|N|C|3446
5AN9|1|N|U|3447
5AN9|1|N|G|3448
5AN9|1|N|A|3449
5AN9|1|N|A|3450
5AN9|1|N|C|3451
5AN9|1|N|G|3452
5AN9|1|N|C|3453
5AN9|1|N|C|3454
5AN9|1|N|U|3455
5AN9|1|N|C|3456
5AN9|1|N|U|3457
5AN9|1|N|A|3458
5AN9|1|N|A|3459
5AN9|1|N|G|3460

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains

Chain B

60S RIBOSOMAL PROTEIN L9

Chain H

UBIQUITIN-60S RIBOSOMAL PROTEIN L40