HL_5E7K_097

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5E7K|1|14|G|2751, 5E7K|1|14|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5E7K_097 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.2572

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

5E7K|1|14|C|2745
5E7K|1|14|U|2746
5E7K|1|14|G|2747
5E7K|1|14|A|2748
5E7K|1|14|A|2749
5E7K|1|14|A|2750
5E7K|1|14|G|2751
5E7K|1|14|C|2752
5E7K|1|14|A|2753
5E7K|1|14|U|2754
5E7K|1|14|C|2755
5E7K|1|14|U|2756
5E7K|1|14|A|2757
5E7K|1|14|A|2758
5E7K|1|14|G|2759

Current chains

Chain 14

23S rRNA

Nearby chains

Chain 15

50S ribosomal protein L13

Chain 59

50S ribosomal protein L6