HL_5FCJ_027

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

5FCJ|1|1|A|1245

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCJ_027 not in the Motif Atlas

Geometric match to HL_5TBW_027

Geometric discrepancy: 0.0858

The information below is about HL_5TBW_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5FCJ|1|1|C|1239
5FCJ|1|1|A|1240
5FCJ|1|1|U|1241
5FCJ|1|1|G|1242
5FCJ|1|1|G|1243
5FCJ|1|1|A|1244
5FCJ|1|1|A|1245
5FCJ|1|1|G|1246
5FCJ|1|1|U|1247
5FCJ|1|1|C|1248
5FCJ|1|1|G|1249

Current chains

Chain 1

25S ribosomal RNA

Nearby chains