HL_5FCJ_205
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUUUGUUGGUUUCU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FCJ_205 not in the Motif Atlas
- Geometric match to HL_4V88_205
- Geometric discrepancy: 0.0812
- The information below is about HL_4V88_205
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_88364.1
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5FCJ|1|6|A|829
5FCJ|1|6|U|830
5FCJ|1|6|U|831
5FCJ|1|6|U|832
5FCJ|1|6|U|833
5FCJ|1|6|G|834
5FCJ|1|6|U|835
5FCJ|1|6|U|836
5FCJ|1|6|G|837
5FCJ|1|6|G|838
5FCJ|1|6|U|839
5FCJ|1|6|U|840
5FCJ|1|6|U|841
5FCJ|1|6|C|842
5FCJ|1|6|U|843
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c1
- 40S ribosomal protein S11-A,40S ribosomal protein S11-A,40S ribosomal protein S11-A,40S ribosomal protein S11-A,40S ribosomal protein S11-A (uS17)
Coloring options: