HL_5G2X_002
3D structure
- PDB id
- 5G2X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure a of Group II Intron Complexed with its Reverse Transcriptase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAAGAUAACAC
- Length
- 12 nucleotides
- Bulged bases
- 5G2X|1|A|A|50, 5G2X|1|A|A|51, 5G2X|1|A|G|52, 5G2X|1|A|A|58
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35608.1
- Basepair signature
- cWW-tSH-R-R-R-R-R
- Number of instances in this motif group
- 5
Unit IDs
5G2X|1|A|G|48
5G2X|1|A|U|49
5G2X|1|A|A|50
5G2X|1|A|A|51
5G2X|1|A|G|52
5G2X|1|A|A|53
5G2X|1|A|U|54
5G2X|1|A|A|55
5G2X|1|A|A|56
5G2X|1|A|C|57
5G2X|1|A|A|58
5G2X|1|A|C|59
Current chains
- Chain A
- GROUP II INTRON
Nearby chains
No other chains within 10ÅColoring options: