HL_5G2X_012

3D structure

PDB id

5G2X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure a of Group II Intron Complexed with its Reverse Transcriptase

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGUAACGCCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59580.1

Basepair signature

cWW-R-R-tWH-R-R-R-R

Number of instances in this motif group

2

Unit IDs

5G2X|1|A|G|494
5G2X|1|A|G|495
5G2X|1|A|G|496
5G2X|1|A|U|497
5G2X|1|A|A|498
5G2X|1|A|A|499
5G2X|1|A|C|500
5G2X|1|A|G|501
5G2X|1|A|C|502
5G2X|1|A|C|503
5G2X|1|A|C|504

Current chains

Chain A

GROUP II INTRON

Nearby chains