HL_5HAU_020
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAACAG
- Length
- 7 nucleotides
- Bulged bases
- 5HAU|1|1A|C|669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5HAU_020 not in the Motif Atlas
- Homologous match to HL_4WF9_021
- Geometric discrepancy: 0.2515
- The information below is about HL_4WF9_021
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
5HAU|1|1A|C|665
5HAU|1|1A|G|666
5HAU|1|1A|A|667
5HAU|1|1A|A|668
5HAU|1|1A|C|669
5HAU|1|1A|A|670
5HAU|1|1A|G|671
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 14
- 50S ribosomal protein L33
- Chain 16
- 50S ribosomal protein L35
- Chain 1N
- 50S ribosomal protein L15
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
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