HL_5I4L_137
3D structure
- PDB id
- 5I4L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUAAUUG
- Length
- 8 nucleotides
- Bulged bases
- 5I4L|1|5|U|1081
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5I4L_137 not in the Motif Atlas
- Homologous match to HL_5TBW_024
- Geometric discrepancy: 0.0867
- The information below is about HL_5TBW_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
5I4L|1|5|C|1076
5I4L|1|5|U|1077
5I4L|1|5|U|1078
5I4L|1|5|A|1079
5I4L|1|5|A|1080
5I4L|1|5|U|1081
5I4L|1|5|U|1082
5I4L|1|5|G|1083
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain l5
- 60S ribosomal protein L5
- Chain n1
- 60S ribosomal protein L21-A
- Chain n9
- 60S ribosomal protein L29
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