HL_5I4L_190
3D structure
- PDB id
- 5I4L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 5I4L|1|6|U|232
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5I4L_190 not in the Motif Atlas
- Homologous match to HL_4V88_190
- Geometric discrepancy: 0.1165
- The information below is about HL_4V88_190
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91015.1
- Basepair signature
- cWW-cWH-F
- Number of instances in this motif group
- 4
Unit IDs
5I4L|1|6|C|230
5I4L|1|6|U|231
5I4L|1|6|U|232
5I4L|1|6|C|233
5I4L|1|6|G|234
5I4L|1|6|G|235
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: