HL_5IB7_151
3D structure
- PDB id
- 5IB7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.99 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 5IB7|1|1H|C|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IB7_151 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.0463
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
5IB7|1|1H|U|566
5IB7|1|1H|A|567
5IB7|1|1H|U|568
5IB7|1|1H|U|569
5IB7|1|1H|G|570
5IB7|1|1H|A|571
5IB7|1|1H|A|572
5IB7|1|1H|G|573
5IB7|1|1H|C|574
5IB7|1|1H|A|575
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain 78
- 50S ribosomal protein L15
- Chain D8
- 50S ribosomal protein L21
- Chain N8
- 50S ribosomal protein L32
Coloring options: