HL_5IB7_157
3D structure
- PDB id
- 5IB7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.99 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 5IB7|1|1H|U|747, 5IB7|1|1H|A|751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IB7_157 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.0545
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
5IB7|1|1H|G|744
5IB7|1|1H|G|745
5IB7|1|1H|A|746
5IB7|1|1H|U|747
5IB7|1|1H|G|748
5IB7|1|1H|C|749
5IB7|1|1H|A|750
5IB7|1|1H|A|751
5IB7|1|1H|A|752
5IB7|1|1H|C|753
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain E8
- 50S ribosomal protein L22
- Chain N8
- 50S ribosomal protein L32
- Chain P8
- 50S ribosomal protein L34
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