HL_5IMR_011

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

5IMR|1|A|U|208, 5IMR|1|A|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5IMR_011 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.5369

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

5IMR|1|A|G|200
5IMR|1|A|C|201
5IMR|1|A|U|208
5IMR|1|A|U|209
5IMR|1|A|U|210
5IMR|1|A|G|216
5IMR|1|A|C|217

Current chains

Chain A

16S ribosomal RNA

Nearby chains