HL_5IMR_027
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 5IMR|1|A|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IMR_027 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.5277
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5IMR|1|A|G|963
5IMR|1|A|A|964
5IMR|1|A|A|965
5IMR|1|A|G|966
5IMR|1|A|C|967
5IMR|1|A|A|968
5IMR|1|A|A|969
5IMR|1|A|C|970
5IMR|1|A|G|971
5IMR|1|A|C|972
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain M
- 30S ribosomal protein S9
- Chain N
- 30S ribosomal protein S10
- Chain Q
- 30S ribosomal protein S13
Coloring options: