HL_5IMR_074
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- CCCGUACGGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IMR_074 not in the Motif Atlas
- Geometric match to HL_4V9F_003
- Geometric discrepancy: 0.2995
- The information below is about HL_4V9F_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
5IMR|1|D|C|1531
5IMR|1|D|C|1532
5IMR|1|D|C|1533
5IMR|1|D|G|1534
5IMR|1|D|U|1535
5IMR|1|D|A|1536
5IMR|1|D|C|1537
5IMR|1|D|G|1538
5IMR|1|D|G|1539
5IMR|1|D|G|1540
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: