HL_5IQR_098
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 5IQR|1|2|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5IQR_098 not in the Motif Atlas
- Homologous match to HL_5J7L_029
- Geometric discrepancy: 0.132
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5IQR|1|2|G|1356
5IQR|1|2|A|1357
5IQR|1|2|U|1358
5IQR|1|2|C|1359
5IQR|1|2|A|1360
5IQR|1|2|G|1361
5IQR|1|2|A|1362
5IQR|1|2|A|1363
5IQR|1|2|U|1364
5IQR|1|2|G|1365
5IQR|1|2|C|1366
Current chains
- Chain 2
- SSU rRNA
Nearby chains
- Chain h
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S9
- Chain o
- 30S ribosomal protein S10
- Chain s
- 30S ribosomal protein S14
Coloring options: